Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891245.1_cds_XP_016445982.1_40887
CDS Infomation

[gene=LOC107771166] [db_xref=GeneID:107771166] [protein=putative late blight resistance protein homolog R1B-14] [protein_id=XP_016445982.1] [location=complement(join(169..1682,2236..2362))] [gbkey=CDS]
Sequence

ATGCTTGGAAGTCCGTCTAGAAGTAGTTTTAAGACAAATGCTGTTGTGGGTCTTGATGAT
GATTTGGAAAAGATCATAGAAAGACTACTTGGGTCCTCATCCGAGAGAGAAGTTATTGCA
ATTACAGGTATGGGTGGTATTGGCAAAACGACACTTGCTAAAAAAGCTTATGATCATCTT
CAAGTTAGGTCTCGCTTTGACATTCATGCGTGGGTTACAGTATCTCGAGAGTATGAAATG
AGAAGATTGTTGTTAAGTCTCGTCTGTTGCATTCCAGGCATGGCCGATAAATTTCTAGAG
AAGACTGAGGATGAATTAGCAGAGTTGTTATATAGAAAACTAAAGGATCGAAGATATCTG
ATTGTCGTTGATGATATTTGGAGTACCAAAGTTTGGGATAATGTAACAAGATGTTTTCCA
GATGACAACAATGGGAGTCGAATCATATTAACAAGTATGCTTAAGGATGTGGCTGCTTAT
GCTAATCCTGATAGCCCTTTGCATGAGATGGGGGTATTAAGTTTAGATGATAGTTGGAAA
TTACTTTCTATTAAGGTTTTTGGGGCAAATGATGTTTGTCCTTCTGAATTGGAGGATAAT
GGGAAGCAAATAGCAGAAAAATGTGGTGGACTTCCTTTGGCAATTCTTGTGGTTGCAGGA
TATCTTTCTAAAATTGCTAGGAGAAGAGAAAGTTGGATTATTGTTGCCAAAACTGTAAGT
TCAGTTGTTGCTAATGATCCTGATAAATGCCTAAGAGTGCTTGGTATGAGTTACAATTAC
CTACCAAACCACCTCAAGCCATGCTTCCTCTCTATGGGAGCTTTTCCCGAAGACTTTGAA
ATAAAAGCTCGGACTTTGATCCAAGTTTGGGTTGCTGAAGGGTTTCTAAAAGCCGAAAGG
CTCAAGAGCTTGGAAAAAGTTGCAGAAGAGTGTTTGGAGGATCTTAGTAGTATAAATCTG
ATAATGATAAGAAAGAGGAGGTTTAACAGCGAGATCAGAAGTTGTGGCATACATGATTTG
TTGAGGAACTTGAGCTTAAGAGAAGCTGAAAAAGAGAAGTCTCTGCATGTGACATCAATT
CATTATGTCTCAAACTTTCTAGCTCAAAGGCATGAGCGTCGTGGCTTTAACTTTCTTTCC
GACATTTCTCTGGATGATTCTAGTGAGTTATCATCTCAAGTTGTTCGATTGATGTTTTTC
TGGGGTAAACTATTAATACATGATCCGCCTCATAGGCAAATGTCCTTATTCACAAGCTTC
AAACTTATCAGAGTGCTGGCTATTTTTTCTCATTTGTTTTCTTCGTTCCCAGTTGAGATA
ACACGGCTAATTCATCTGAGGTACCTTTGGATTCGATCAAATGGTAATCTTCCTGCATCA
GTGTCTCAGCTTTATCATCTGCAAACATTGGTGCTTCAACAGTCGAAATTATTTTATATG
TACAAAACTTTAATTTTGCCTCGGAAGATCTGGAACATGACACAGCTGAGGCGTCTGCGT
CTACTGAGTAGAAACTATTTGTCTAAGCCTAAAAGAACTGATGAGGGAGCAACAGAGAGT
GTTTTGGGGCTAAGAAATCTAGAGGAACTTTCTCATTTATGTTTAGCTAGTTGTACAGAG
GAAGTCTTTTCATGCCTGTGA

Peptide Sequence

PEP ID

XP_016445982.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1B-14 [Nicotiana tabacum]
Sequence

MLGSPSRSSFKTNAVVGLDDDLEKIIERLLGSSSEREVIAITGMGGIGKTTLAKKAYDHL
QVRSRFDIHAWVTVSREYEMRRLLLSLVCCIPGMADKFLEKTEDELAELLYRKLKDRRYL
IVVDDIWSTKVWDNVTRCFPDDNNGSRIILTSMLKDVAAYANPDSPLHEMGVLSLDDSWK
LLSIKVFGANDVCPSELEDNGKQIAEKCGGLPLAILVVAGYLSKIARRRESWIIVAKTVS
SVVANDPDKCLRVLGMSYNYLPNHLKPCFLSMGAFPEDFEIKARTLIQVWVAEGFLKAER
LKSLEKVAEECLEDLSSINLIMIRKRRFNSEIRSCGIHDLLRNLSLREAEKEKSLHVTSI
HYVSNFLAQRHERRGFNFLSDISLDDSSELSSQVVRLMFFWGKLLIHDPPHRQMSLFTSF
KLIRVLAIFSHLFSSFPVEITRLIHLRYLWIRSNGNLPASVSQLYHLQTLVLQQSKLFYM
YKTLILPRKIWNMTQLRRLRLLSRNYLSKPKRTDEGATESVLGLRNLEELSHLCLASCTE
EVFSCL

Transcript Sequence

Gene sequence data has not been registered.